splinetree - Longitudinal Regression Trees and Forests
Builds regression trees and random forests for longitudinal or functional data using a spline projection method. Implements and extends the work of Yu and Lambert (1999) <doi:10.1080/10618600.1999.10474847>. This method allows trees and forests to be built while considering either level and shape or only shape of response trajectories.
Last updated 6 years ago
5.24 score 4 stars 29 scripts 206 downloadscountsplit - Splitting a Count Matrix into Independent Folds
Implements the count splitting methodology from Neufeld et al. (2022) <doi:10.1093/biostatistics/kxac047> and Neufeld et al. (2023) <arXiv:2307.12985>. Intended for turning a matrix of single-cell RNA sequencing counts, or similar count datasets, into independent folds that can be used for training/testing or cross validation. Assumes that the entries in the matrix are from a Poisson or a negative binomial distribution.
Last updated 1 years ago
cpp
4.43 score 20 stars 27 scripts 228 downloads